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Presentations (O- Oral, P- Poster)
18. Kognole AA and MacKerell AD Jr., "Development and Evaluation of the Silcs Methodology for Targeting RNA with Small Molecules" Biophysical Society Annual Meeting 2021, Conducted Online; March 2021. (P)17. Sengul MY, Kognole AA and MacKerell AD Jr., "Enhanced Sampling of RNA Folding/Unfolding Configurations using Machine Learning/Grand Canonical Monte Carlo" Biophysical Society Annual Meeting 2021, Conducted Online; March 2021. (P)
16. Kognole AA and MacKerell AD Jr., "Changes in the ionic atmosphere impact the transition from compact intermediates to the folded state in Twister RNA" American Chemical Society Annual Meeting 2020, Conducted Online; March 2020. (O) (Click here for slides)
15. Kognole AA and MacKerell AD Jr., “The Role of Mg+2 Ion Interactions in Folding of the Twister Ribozyme and PreQ1 Riboswitch Revealed through Umbrella Sampling Combined with Oscillating Chemical Potential Grand Canonical Monte Carlo/Molecular Dynamics Simulations” Biophysical Society Annual Meeting 2019, Baltimore, MD, USA; March 2019. (Poster)
14. Kognole AA and Payne CM, “Understanding Substrate Recognition Mechanisms in Type B Carbohydrate Binding Modules Through Molecular Simulation” 6th Annual Bluegrass Molecular Biophysics Symposium, Lexington, KY; May 2017. (Oral)
13. Kognole AA and Payne CM, “Understanding Substrate Recognition Mechanisms in Type B Carbohydrate Binding Modules Through Molecular Simulation” Materials and Chemical Engineering Graduate Student Symposium, Lexington, KY; May 2017. (Oral) << A. A. Kognole recipient of outstanding graduate student research award >>
12. Kognole AA and Payne CM, “Inhibition of the Mammalian Glycoprotein YKL-40: Identification of the Physiological Ligand,” Ashland Inc. Distinguished Lectures and Drug Discovery and Development Symposium, Lexington, KY; November 2016. (Oral)
11. Kognole AA and Payne CM, “Cellulose-specific Type B Carbohydrate Binding Modules: Understanding Substrate Recognition Mechanisms Through Molecular Simulation,” Midwest Enzyme Chemistry Conference (MECC), Chicago, IL; October 2016. (Poster)
10. Kognole AA, Payne CM, “Cellulose-specific Type B Carbohydrate Binding Modules: Understanding Substrate Recognition Mechanisms Through Molecular Simulation”. Gordon Research Conference (GRC) for Computational Chemistry, Girona, Spain. July 2016. (Poster)
9. Kognole AA, Payne CM, “Inhibition of the Mammalian Glycoprotein YKL-40: Identification of the Physiological Ligand”. Gordon Research Seminar (GRS) for Computational Chemistry, Girona, Spain. July 2016. (Poster)
8. Kognole AA and Payne CM, “Inhibition of the Mammalian Glycoprotein YKL-40: Identification of the Physiological Ligand,” Center for Clinical and Translational Science (CCTS) Spring Symposium, Lexington, KY; April 2016. (Poster)
7. Kognole AA, Payne CM, “Cello-oligomer-binding dynamics and directionality in family 4 carbohydrate-binding modules”. Gordon Research Conference (GRC) for Cellulases, Cellulosomes and other Carbohydrate Modifying Enzymes, Andover, NH, USA; August 2015. (Poster)
6. Kognole AA, Payne CM, “Inhibition of the Mammalian Glycoprotein YKL-40: Identification of the Physiological Ligand”. Swedish Structural Biology Network (SBNet) Annual Conference, Tällberg, Sweden; June 2015. (Oral)
5. Kognole AA and Payne CM, “Inhibition of the Mammalian Glycoprotein YKL-40: Identification of the Physiological Ligand,” Bluegrass Molecular Biophysics Symposium, Lexington, KY; May 2015. (Poster)
4. Kognole AA, Payne CM, “ Ligand binding dynamics and directionality in Cellulomonas fimi Family 4 Carbohydrate Binding Modules”. AIChE Annual Meeting, Atlanta, GA, USA; November 2014. (Oral)
3. Kognole AA and Payne CM, “Inhibition of the Mammalian Glycoprotein YKL-40: Identification of the Physiological Ligand,” AIChE Annual Meeting, Atlanta, GA; November 2014. (Oral)
2. Kognole AA and Payne CM, “Ligand Binding Dynamics and Directionality in Cellulomonas fimi Family 4 Carbohydrate Binding Modules,” Materials and Chemical Engineering Graduate Student Fall Symposium, Lexington, KY; September 2014. (Poster)
1. Kognole AA and Payne CM, “Ligand Binding Dynamics and Directionality in Cellulomonas fimi Family 4 Carbohydrate Binding Modules,” Bluegrass Molecular Biophysics Symposium, Lexington, KY; May 2014. (Poster)